Description:
In the QuNex command line help, the spatial smoothing kerne’s default FWHM is 6mm, but if I don’t set the spatial smoothing FWHM when I run preprocess_conc command (so the default value is used), it will be 2mm in the log file. I was wondering why they are different.
Logs:
Options used:
----------------
boldname: bold
concname: Atlas_s_hpss_res-mm1dmSqm1dSq_AllExps_noL1RO_pl
fidlname: AllExpsTasks_noL1RO_evRegNum35_PL_ring7_sz20_D1
surface_smooth: 2
volume_smooth: 2
voxel_smooth: 1
lopass_filter: 0.09
hipass_filter: 0.008
framework_path:
wb_command_path:
omp_threads: 0
smooth_mask: nonzero
dilate_mask: /gpfs/gibbs/pi/n3/software/MNAP/library/data/atlases/MNITemplates/MNI152_T1_2mm_brain_mask.nii.gz
glm_matrix: both
glm_residuals: none
glm_name:
bold_tail: _Atlas_s_hpss_res-mm1dmSqm1dSq
ref_bold_tail:
bold_variant:
img_suffix:
--> starting the loop
** For an example of how to report an issue, please refer to this post.