[RESOLVED] Checking dependencies versions within QuNex singularity container

Hello, I’m a new user of the QuNex container. I am wondering if there is a way to know the versions of each dependencies (HCP pipelines, FSL, Freesurfer, Connectome Workbench, etc.) included in the container. I plan to use the singularity container in my institution’s computing cluster, which uses SLURM as scheduler.

Thank you.


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Hi Estephan,

Welcome to the QuNex forums! The easiest way is to use the --env_status flag with the qunex_container script. For example:

qunex_container \
    --container="/gpfs/project/fas/n3/software/Singularity/qunex_suite-0.91.9.sif" \

When you execute this, QuNex will check if everything is OK with the environment inside the container and also printout all dependencies and their versions.

An alternative is to use singularity shell to enter the container and then explore the environment manually.

Hi Estephan, did the above solution help you out?

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Sorry I missed this. Yes, the solution worked for me. Thank you.