[RESOLVED] Reinstall qunex

Dear QuNex experts:

I was wondering if there is a way to cleanly reinstall QuNex? The reason I asked this is because I forgot to install cuda 9.1 when I first installed QuNex. I have now installed CUDA 9.1 but it seems that the fsl in qunex still wouldn’t run eddy_quad. So I would like to see if I could cleanly reinstall QuNex so that it can use all the functions from fsl that support GPU.

Your help would be much appreciated! Thank you very much.


Hi Ed,

from your previous post I am assuming that you are using a Singularity container? In that case no reinstallation is required. When using a Singularity container you have to link the CUDA libraries sitting on your local system with the system inside the container. The easiest way to do this is to simply ad a --nv flag when running a QuNex command with the qunex_container script. If what I described above is not the solution you were looking for, please let me know.


Hi Jure:

Thanks so much for your swift response indeed!

You are right, I have been using the singularity container downloaded from gitlab page and now is working perfectly fine;)

Thank so much for your help indeed!