Hi QuNex Team,
I am running the dwi_legacy_gpu command using QuNex version v0.97.3. I encountered an error with eddy_cuda10.2, error stack trace is provided below. I am unable to decipher the error log.
/opt/fsl/fsl-6.0.6.2/bin/eddy_cuda10.2 --imain=/data/Diffusion/10189_DWI_dir64_PA --mask=/data/Diffusion/rawdata/10189_DWI_dir64_PA_nodif_brain_mask --acqp=/data/Diffusion/acqparams/10189_DWI_dir64_PA/acqparams.txt --index=/data/Diffusion/acqparams/10189_DWI_dir64_PA/index.txt --bvecs=/data/Diffusion/10189_DWI_dir64_PA.bvec --bvals=/data/Diffusion/10189_DWI_dir64_PA.bval --fwhm=10,0,0,0,0 --ff=10 --nvoxhp=2000 --flm=quadratic --out=/data/Diffusion/eddy/10189_DWI_dir64_PA_eddy_corrected --data_is_shelled --repol -v
Reading images
Performing volume-to-volume registration
Running Register
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EDDY::: Eddy failed with message q���U
QuNex command:
qunex dwi_legacy_gpu \
--sessionsfolder='/dataset1/sessions' \
--sessions='10189' \
--diffdatasuffix='DWI_dir64_PA' \
--usefieldmap='no' \
--pedir=2 \
--echospacing='0.69' \
--unwarpdir='-y' \
--scanner='siemens
nvidia-smi output on the gpu instance
I have updated the default CUDA version to 10.2 as I have encountered an issue with 10.1 /opt/qunex/bash/qx_utilities/dwi_legacy_gpu.sh: line 565: /opt/fsl/fsl/bin/eddy_cuda10.1: No such file or directory
Could you please assist me in resolving this issue? I have attached the complete log output of the dwi_legacy_gpu command below. Let me know if you need any more information. Thanks in advance.
Thanks
Suhas Reddy
qunex dwi_legacy_gpu_error.log (4.3 KB)